Journal: The Journal of Biological Chemistry
Article Title: APP family is a regulator of endo-lysosomal membrane vulnerability
doi: 10.1016/j.jbc.2025.110774
Figure Lengend Snippet: Comprehensive lipid profiles in the membrane fraction of APP / APLP2 dKO MEF cells and WT controls. A, the same number of APP/APLP2 dKO or WT MEF cells was subjected to subcellular fractionation, and total cholesterol levels in their membrane fractions were measured using the total cholesterol colorimetric assay kit. Total cholesterol levels significantly increased in APP/APLP2 dKO MEF cells compared with WT controls. N = 3. Unpaired t test, ∗∗ p < 0.01. B, the membrane fraction of APP/APLP2 dKO MEF cells or WT controls was subjected to LC–MS/MS lipidomic analysis, and the signal area (a.u.) was measured for various lipid species (N = 4 independent experiments). The analysis recapitulated the significantly increased total cholesterol level, which is based on the sum of all the detected cholesterol species, in APP/APLP2 dKO compared with WT MEF cells. Unpaired t test, ∗ p < 0.05. C, the heatmap and bar graphs were generated from log-transformed area and the exact area data, respectively, showing differences in individual cholesterol species between APP/APLP2 dKO MEF cells and WT controls. Dots in bar graphs correspond to the values in individual experiments, and bar graphs show means. Mann–Whitney U test, ∗ p < 0.05. D, similarly, the heatmap and bar graphs are shown for other lipid species, where the areas of all the lipid species are combined. Mann–Whitney U test, ∗∗ p < 0.01, ∗ p < 0.05. APLP, amyloid precursor–like protein; APP, amyloid precursor protein; dKO, double KO; MEF, mouse embryonic fibroblast.
Article Snippet: To measure total cholesterol levels, including free cholesterol and cholesterol esters, the total cholesterol colorimetric assay kit (Elabscience) was used according to the manufacturer’s protocol.
Techniques: Membrane, Fractionation, Colorimetric Assay, Liquid Chromatography with Mass Spectroscopy, Generated, Transformation Assay, MANN-WHITNEY